Presentation + Paper
19 December 2022 A physics-based noise formation model for optical coherence tomography system denoising
Jingsi Chen, Zhengyu Qiao, Yong Huang, Qun Hao
Author Affiliations +
Abstract
Optical coherence tomography (OCT) as an interferometric imaging technique, suffers from massive noise. Denoisingmethods are applied essentially to improve image quality in OCT community. The conventional methods rely onpost image processing algorithms such as non-local mean filtering, block-matching and 3D filtering algorithm. However, these conventional noise reduction methods could inevitably cause the destruction of image details, reduce the contrast at the edge of OCT images, and result in a degeneration of image quality. Current deep learning methods often ignorethespecificity of system, therefore haven’t taken advantages of the unique characteristics of different systems. In this work, we present a deep learning noise reduction method using the network architecture trained from synthetic OCTsignalswith random noise that are generated from the noise formation model characterized by our custom-built specificSD-OCT (Spectrum-Domain optical coherence tomography) system. We analyze the signal formation process and the noisegeneration pathway of our system, thereby enabling the construction of a noise formation model. DN-Unet (DenoisingUnity Network) is applied to train the datasets generated by our proposed noise formation model and the multi-to-singlestrategy is developed to enhance the network capability. Preliminary empirical results collectively showthat the networkcan reach an average of 25 dB signal to noise ratio (SNR) improvement while preserving detail structures, whichdemonstrates the effectiveness of our noise reduction method. This method has the potential to be adopted byother systems without the need for large number of golden-standard image generation.
Conference Presentation
© (2022) COPYRIGHT Society of Photo-Optical Instrumentation Engineers (SPIE). Downloading of the abstract is permitted for personal use only.
Jingsi Chen, Zhengyu Qiao, Yong Huang, and Qun Hao "A physics-based noise formation model for optical coherence tomography system denoising", Proc. SPIE 12320, Optics in Health Care and Biomedical Optics XII, 123200S (19 December 2022); https://doi.org/10.1117/12.2645155
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KEYWORDS
Optical coherence tomography

Denoising

Signal to noise ratio

Image quality

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